《Table 2 The comparison analysis of amino acid sequences using DNAMAN》

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《Bioinformatics Analysis on Pathogenic Genes of Botrytis cinerea Pers.》

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The protein sequences of Aac were compared with corresponding amino acid sequences of pathogenic genes of other plant pathogens.It could be seen from Table 2 that yp_968837 and AAZ34500，yp_968846 and AAW73346，yp_968848 and AAF61285，yp_96929 and AAZ356963，yp_970484 and CEL40510，and yp_970742 and CAO95583 were aligned.The homology values were not high，but the similar residues all reached one half or more，and except that protein yp_970484 had a higher value，the gap values were all lower than one half.Comprehensively，the three pairs of proteins with higher matching degrees were yp_968848 and AAF61285，yp_969269 and AAZ35693，and yp_968837 and AAZ34500，indicating that the similarity between the functions of each pair was higher.Because these pathogenic genes of other plant bacterial pathogens are all from the hrp gene cluster of type III secretion system，these proteins were also predicted to be coded by hrp gene cluster.